Interviewer 0:00:23
Good day, Muthu Rama Krishnan Mookiah. I'm Arjun. I've had a look through your background and your professional record. I'm interested in hearing more about your work and how you see yourself fitting in here with our faculty. Ready to start?
Interviewer 0:00:29
Please start by introducing your professional journey in academia.
Muthu Rama Krishnan Mookiah 0:00:42
My name is Mutharama Krishnan.
Muthu Rama Krishnan Mookiah 0:00:52
Uh, I'm currently working as a post-ductor researcher at the University of Dundee.
Muthu Rama Krishnan Mookiah 0:00:57
I start I completed my PhD in the year of 2012 at a School of Medical Science and Technology, IIT Kharagpur.
Muthu Rama Krishnan Mookiah 0:01:12
Uh then I, uh, moved to, uh, Singapore University of Technology and Design, uh, as a post structural surgical law. Uh, then in the year of 2018, I joined as a postsector Research Center, University of Dundee.
Muthu Rama Krishnan Mookiah 0:01:04
Then I joined as a research engineer at the Neon Polytechnic, Singapore.
Muthu Rama Krishnan Mookiah 0:01:25
So first to 15 years of research experience in the field of medical image analysis, machine learning and deep learning.
Muthu Rama Krishnan Mookiah 0:01:26
Umm applied to the.
Muthu Rama Krishnan Mookiah 0:01:35
Healthcare problems so my research mainly.
Muthu Rama Krishnan Mookiah 0:01:46
My research will mainly contribute to the UH retinal image analysis for the cardiovascular disease and the chronic kidney disease and UH.
Muthu Rama Krishnan Mookiah 0:02:16
Brain image analysis for the aging and dementia classification and uh, uh, skin listen classification using microscopic and microscopic images. These are my research, research projects, uh, and uh, the school of science and engineering, uh, school of at bat School of healthcare science and engineering. Also looking for the candidate which are uh, experienced in the medical image analysis and applied AI. Uh, for the preseason medicine, so my.
Muthu Rama Krishnan Mookiah 0:02:19
The role is exactly suitable for that position.
Interviewer 0:02:28
Thank you for sharing your academic journey and research expertise, Professor Krishnan. Quite impressive.
Interviewer 0:02:50
Good morning, Professor. Let's begin with evaluating your expertise in Artificial Intelligence and Machine Learning, particularly as applied to healthcare or health informatics. Could you describe a complex problem you've tackled using AI or ML in the healthcare domain, detailing your approach and rationale?
Muthu Rama Krishnan Mookiah 0:03:02
OK, so my recent project mainly focused on classify the dementia using R2B cell intelligence techniques.
Muthu Rama Krishnan Mookiah 0:03:03
So.
Muthu Rama Krishnan Mookiah 0:03:17
The data set is. The data set we used is MSMI brand cohort data set.
Muthu Rama Krishnan Mookiah 0:03:40
Uh, which are collected from the, which are routinely collected, uh, prime scans, uh, from the, uh, national, uh, NHS Scotland. The images are securely stored in the, uh, national safe ever, umm. So, uh, my role is to, uh, securely access those images and create a cohort.
Muthu Rama Krishnan Mookiah 0:03:43
For the analysis like I created the control and.
Muthu Rama Krishnan Mookiah 0:03:53
Dementia cohort. UH.
Muthu Rama Krishnan Mookiah 0:04:01
Uh, Using I CD10 codes and also, umm, I used uh, prescription, umm, records and hospitals and records. So based on that.
Muthu Rama Krishnan Mookiah 0:04:07
I filter I identified the four dementia categories like such as vascular dementia, Alzheimer dementia, other dementia and unspecified dementia.
Muthu Rama Krishnan Mookiah 0:04:35
So in in in my work mainly 2 pipelines, 1 is SPM based pipeline and one is D planning based pipeline. I worked on the SPM based pipeline, my colleagues worked in the deep learning based pipelines. Then finally we compared the results of these two models. So for the SPM based pipelines, I used T1 weighted MRI images. So initially the images are.
Muthu Rama Krishnan Mookiah 0:04:40
Filtered.
Muthu Rama Krishnan Mookiah 0:05:09
The the brand image would have full brain, it should not be the partial brain and the images should I covered in either 2 reactions or three acquisition. And also we identified identified the different noises present in the image like Kyle noise and artifacts such as motion artifact and. Like.
Muthu Rama Krishnan Mookiah 0:04:53
Based around the set of criteria such as.
Muthu Rama Krishnan Mookiah 0:05:12
The nicest such as, uh.
Muthu Rama Krishnan Mookiah 0:05:26
Salt and pepper. Nice. So I try to initially eliminate these noises, artifacts and the partial brain images.
Muthu Rama Krishnan Mookiah 0:05:28
For my cohort SO, which resulted around 8000 images.
Muthu Rama Krishnan Mookiah 0:05:54
So I used this 8000 images to train the SVM model. So before training the SVM model I extracted the features like the scalar momentum features using Statistical parametric mapping toolbox.
Muthu Rama Krishnan Mookiah 0:06:00
Which helps me to extract the scalar momentum features. Then we used that scalar momentum features of the controller and dementia cases for the dementia class APSN and also we did the dementia subclass classification.
Muthu Rama Krishnan Mookiah 0:06:21
And we did the future dementia risk prediction. So our model performed with the accuracy of 68 to 70 percentage with the tenfold class validation, sorry with the fivefold cross validation.
Muthu Rama Krishnan Mookiah 0:06:26
And this is the initial experiment we have, we have conducted and we try to extend further the experiment with the filtered data set. So that's our next goal.
Interviewer 0:06:58
Thank you for sharing your work, Professor. It seems to be a robust application of AI techniques in healthcare analysis. Concerning your approach:
1. Could you elaborate on the specific advantages of scalar momentum features in dementia classification over alternative feature extraction techniques?
2. How did you ensure the reliability and consistency of the data filtering process—given the identified noise and artifacts—during SVM model training?
Muthu Rama Krishnan Mookiah 0:07:02
OK, uh.
Muthu Rama Krishnan Mookiah 0:07:32
OK, the standard is the Statistical Parametric Mapping Toolbox developed by UCL London. So that toolbox mainly uses using to analyse the mRNA 1 images.
Muthu Rama Krishnan Mookiah 0:07:40
So using this UH parametric mapping toolbox, what it does it try to fit the images into MNI template. Then it segments the UH images into Gray matter, white matter and CSF cerebral final fluid. So our main aim is to identify the UH.
Muthu Rama Krishnan Mookiah 0:07:55
Which are contributing to the aging and dementia. So this toolbox is very much useful to identify such regions.
Muthu Rama Krishnan Mookiah 0:07:50
Brain region, which are uh.
Muthu Rama Krishnan Mookiah 0:08:04
Other than the other feature XML, there are using a whole brain to the deep learning model. So then for the.
Muthu Rama Krishnan Mookiah 0:08:06
So that's why SPM 2 bucks is very useful for our applications. And the second thing is.
Muthu Rama Krishnan Mookiah 0:08:31
The image filtering we have done before doing the experiment and also we have validated with the clinicians before doing the experiment and also we did the summary statistics how many images are. You know affected with Kyle artifact, motion artifact and partial brain. So we identified those images automatically with the natural natural language processing.
Muthu Rama Krishnan Mookiah 0:08:34
And be eliminated so.
Muthu Rama Krishnan Mookiah 0:08:45
We only used the robust images for our applications which are, you know, it's a routinely collected data. So this.
Muthu Rama Krishnan Mookiah 0:08:55
This kind of noises noise is encountered in clinical setup, so as a researcher we try to eliminate such noise before doing any experiment.
Interviewer 0:09:30
Your explanation highlights a rigorous approach, Professor. By leveraging the SPM toolbox and validating filtered data with clinicians, you've established both methodological soundness and domain relevance. Let's transition to evaluating your teaching capabilities.
Could you discuss your approach to simplify complex AI or ML concepts for students who are new to the field? Specifically, how would you explain the idea of feature extraction to students with minimal experience in data science?
Muthu Rama Krishnan Mookiah 0:10:09
OK so before introducing the machine learning and day planning courses to the students, if I first initially try to arrange a initial workshop like a small initial initial workshop like by by explaining the basic concepts of machine learning like what is features and how the features are extracted from the. Images. So for that I try I use the.
Muthu Rama Krishnan Mookiah 0:10:44
Public data sets such as add me that is a brain data set available online. So this is a public data set. It's a dimension data set. So I use that data set to explain the students how what is feature and how the features are extracted and and try to explain the basic concept of logistic regression. That's the main logic behind the neural networks. So I explained that logistic regression then I go with.
Muthu Rama Krishnan Mookiah 0:11:06
The uh, neural network. What is neural network? Then I go with the planning deep learning concepts. So before applying the deep planning concepts, I try to introduce them. What are the packages are required to run the deep learning models or machine learning models? So I usually prefer the open source data, open source coding principles. So I I use open source. Image processing libraries like Open CB and Skit LAN and also I use Pytorch and tensorflow keras for replanning applications.
Muthu Rama Krishnan Mookiah 0:11:10
And for ML applications I use skit line.
Muthu Rama Krishnan Mookiah 0:11:49
SK SK line for SPM classifier and other parameter tuning. So I introduce all these concepts initially before you know taking the class so that you know the students well prepared and and also I try to interact with them often with some students are struggling so I provide a special attention to them and I prepare a small. Problem.
Muthu Rama Krishnan Mookiah 0:11:56
Growth problem in the small small problems like initially what is data and data cleaning and then I try to explain the.
Muthu Rama Krishnan Mookiah 0:12:00
You know model overfitting and how to train the model so all these concepts 1 by 1 so that the students are well familiar with the concepts.
Interviewer 0:12:30
Your teaching methodology seems thorough and student-focused, Professor. Providing foundational knowledge through workshops and using accessible public datasets demonstrates your ability to cater to varying student needs.
Next, let us address your experience guiding research projects. Could you share an example of how you have supervised a student research effort, ensuring both academic rigor and practical relevance?
Muthu Rama Krishnan Mookiah 0:12:56
OK, so I recently guided one of my PhD student in our group. So the project is retinal foundation model for architects and optic optic cup segmentation. So the paper is.
Muthu Rama Krishnan Mookiah 0:13:01
Archived in MET archive online. Retinal foundation model Leveraging retinal foundation model for optic risk and cup segmentation. So in that work I guided the PHJ students.
Muthu Rama Krishnan Mookiah 0:13:19
To the. Basically the model is mainly for the classification task. So I helped the students to change the model into segmentation that the downstream task to segmentation task. So I helped them how to select the best segmentation head for the.
Muthu Rama Krishnan Mookiah 0:13:34
A red phone model. Then we train the directbound model for the segmentation task using publicly available data set as well as our private in-house data set.
Muthu Rama Krishnan Mookiah 0:13:59
So the trained red phone model for the segmentation up task provides the accuracy of more than 96 percentage. So which is one of the great milestone we achieved. So in that project, I mentored in support additional support to my project PA Professor Truco.
Interviewer 0:14:32
Thank you, Professor. It's evident that you play an active and expert role in supporting research efforts, particularly in adapting models for advanced tasks. Your mentorship approach reflects a balance of technical guidance and academic oversight.
Building on this, let's consider your approach to student assessments. How do you structure evaluative components, such as practical exams or written assessments, to gauge both understanding and application of AI/ML concepts effectively?
Muthu Rama Krishnan Mookiah 0:14:49
OK, so I try to arrange a quiz in the classrooms and also try to provide assignments.
Muthu Rama Krishnan Mookiah 0:14:56
Then I also, uh, do that theory test. So please assessment through assignments.
Muthu Rama Krishnan Mookiah 0:15:29
Like assignment in the sense I try to create a small mini projects to the students so that they can do the project so that will be evaluated and also the theory exam through the examination. So these three concepts I would like to introduce in my teaching and also in my teaching. I try to in the class, I try to provide the Jupyter note notebook quotes before the class starts so that you know the students come up, you know like.
Muthu Rama Krishnan Mookiah 0:15:36
They can prepare well with the the the concept which I'm going to teach on that day. So the students can learn both theory as well as we can test the same theory.
Muthu Rama Krishnan Mookiah 0:15:49
Using Google to understand the concepts of machine learning and replanning. So my assessment method is quiz assignment and the examination.
Muthu Rama Krishnan Mookiah 0:15:48
With the Jupyter notebook or collab.
Interviewer 0:16:18
Your approach to assessments seems well-rounded, Professor. Combining quizzes, assignments, and theory exams while leveraging tools like Jupyter Notebook ensures comprehensive evaluation of both theoretical understanding and practical application.
Let’s now turn to your publication experience. Could you highlight one of your recent impactful research publications, emphasizing its significance in the AI or health informatics domain?
Muthu Rama Krishnan Mookiah 0:16:29
OK, so recently, uh, we publiced a paper on uh, uh, diapatology journal.
Muthu Rama Krishnan Mookiah 0:16:58
Which are, which focuses mainly for the cardiovascular disease classification, like identifying the major adverse cardiac event using the retinal fundus photographs. So in that work, uh, and the second author, so I helped, I'm the third author, sorry, I'm the third author. So I helped the PHLE student, uh, by doing, by selecting the deep learning model. So in that particular work, we have selected AP Synet B2.
Muthu Rama Krishnan Mookiah 0:17:26
And we used a the images of Type 2 diabetes patients, the images acquired from the left and right eye. And we compared, we trained the model with the left and right eye. And we try to compare our deep planning based model with the cardiovascular risk assessment, traditional cardiovascular risk assessment core score.
Muthu Rama Krishnan Mookiah 0:17:38
So our model provide the.
Muthu Rama Krishnan Mookiah 0:17:50
Similar results like compared to the traditional cardio cardiovascular score of .7. So this provides the.
Muthu Rama Krishnan Mookiah 0:18:00
You know the healthcare data can be used to train the AI models to get the traditional clinical assessments. So and also we have done.
Muthu Rama Krishnan Mookiah 0:18:22
We identified our CBD risk prediction model provide better performance even with the 10 year cardiovascular risk prediction. So this is one of the impactful research we have done recently.
Interviewer 0:18:52
Impressive contribution, Professor. Your work combining AI with healthcare data to match and enhance traditional cardiovascular risk prediction models is highly impactful, especially with the integration of explainability for clinical interpretations.
Finally, I’d like to address your industry experience. Could you provide an example of how your consultancy work or industry collaboration has influenced your research or teaching methods?
Muthu Rama Krishnan Mookiah 0:19:06
OK, so.
Muthu Rama Krishnan Mookiah 0:19:25
I recently worked with the project uh, uh, chronic kidney disease prediction using retinal photographs. This project is funded by the Asha Zenica, so I have a uh.
Muthu Rama Krishnan Mookiah 0:19:38
I, I supported as a Seneca to provide the, uh, to provide their model, uh, like to provide, to train their model like, uh, to the uh, uh, safe urban environment, uh, with the University of Dundee, so.
Muthu Rama Krishnan Mookiah 0:19:57
We used the routinely collected data from the year 2005 to 2022. So these datasets I filtered out and for the for the chronic kidney disease prediction. So I filtered as per the industrial needs. So I filtered the data and I supported them to egress their model to the national safe weapon.
Muthu Rama Krishnan Mookiah 0:20:00
And train the model, uh, the help of the Amazon Web Services.
Muthu Rama Krishnan Mookiah 0:20:20
Finally, we try to uh, we did uh, several attack test to identify the model should not leak the data of the real pay Sims. So we have done all the rigorous test to identify the model.
Muthu Rama Krishnan Mookiah 0:20:15
Uh, within the safe urban environment and then.
Muthu Rama Krishnan Mookiah 0:20:34
Like before releasing the model to the company, we did the exact exhaustive test to assess whether the model is not leaking any data set to any data, any patient data.
Muthu Rama Krishnan Mookiah 0:20:44
So then finally the model is egressed and we are writing a paper based on that work with as Anycap.
Muthu Rama Krishnan Mookiah 0:20:39
Patient information.
Interviewer 0:21:15
Thank you, Professor. Your experience with industry collaboration, particularly in securing patient data and ensuring model integrity while addressing chronic kidney disease prediction, demonstrates your ability to bridge research, application, and real-world constraints effectively.
It appears we've covered the key elements of your expertise and experience. Would you like to conclude the interview, or is there anything else you'd like to discuss or highlight before we wrap up?
Muthu Rama Krishnan Mookiah 0:21:28
OK, my ultimate aim is to contribute the VIT uh.
Muthu Rama Krishnan Mookiah 0:21:29
Uh, research team like, uh yeah for, uh, precision medicine.
Muthu Rama Krishnan Mookiah 0:21:40
UH I would like to contribute my research expertise, UH to the better teaching UH for the applied field for biomedical engineering.
Muthu Rama Krishnan Mookiah 0:22:05
And also I would like to ask 2 questions, 1 is what is the setup is available to support grant writing and PhD supervision. And the second question is whether am I able to introduce new modern courses?
Muthu Rama Krishnan Mookiah 0:22:06
For for to the healthcare science and technology department. So that's my questions.
Interviewer 0:22:59
Thank you for your questions, Professor. Based on the job description:
1. Regarding grant writing and PhD supervision: The position actively supports research development activities, including R&D and consultancy services. This implies the institution provides resources and encouragement for grant applications and PhD mentorship. However, specific setup details would likely be clarified by the department once hired.
2. For introducing modern courses: The role encourages curriculum development and innovation. It seems there is flexibility to propose new courses aligned with healthcare science and technology, especially if they address emerging fields like precision medicine or AI applications.
Is there anything further you'd like to discuss or clarify?
Muthu Rama Krishnan Mookiah 0:23:05
Thank you.
Muthu Rama Krishnan Mookiah 0:23:19
Yes, I want to conclude the interview. Thank you very much.
Interviewer 0:23:14
You're most welcome, Professor. Just to confirm, would you like to conclude the interview at this point? Please let me know.